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Table 2 Discrimination success rate and performance using the kmer-based method at different Kmer sizes

From: PTIGS-IdIt, a system for species identification by DNA sequences of the psbA-trnH intergenic spacer region

Size of Kmer Discrimination success rate Performance (cpu time cost : mS)
2 0.761 95.3
3 0.775 390.4
4 0.795 1564.2
5 0.823 5060.4
6 0.813 19007.1
7 0.611 74949.3
  1. The test data is the same as those shown in Table 1.