Skip to main content
Figure 1 | BMC Bioinformatics

Figure 1

From: A linguistic rule-based approach to extract drug-drug interactions from pharmacological documents

Figure 1

Architecture for drug-drug interactions extraction. This figure shows the pipeline architecture of our drug-drug interaction prototype. Firstly, texts are processed by the MMTx program. This tool performs sentence splitting, tokenization, POS-tagging, chunking, and linking of phrases with UMLS concepts. Then, appositions and coordinate structures are interpreted based on shallow syntactic parsing provided by the UMLS MetaMap tool (MMTx). Subsequently, complex and compound sentences are broken down into clauses from which simple sentences are generated by a set of simplification rules. Finally, the lexical patterns are matched with the generated sentences in order to extract DDIs.

Back to article page