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Table 5 Scoring table for combining the results of the AASsites analysis tools

From: Genome-wide prediction of splice-modifying SNPs in human genes using a new analysis pipeline called AASsites

Score

1

2

3

4

5

0

SNP distance to splice site

<=2 nt

>2 nt and <=4 nt

>4 nt

-

-

-

Gene prediction

Intron/ Exon disappared/ appeared

Intron/Exon modified

No change

No prediction available

-

-

ORF

Indel with frameshift

Indel without frameshift

No frameshift no stop-codon appeared

New Amino Acid

No genewise prediction

Stop-codon appeared