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Table 2 Characteristics of SNP networks in different thresholds of T1D study.

From: SNP and gene networks construction and analysis from classification of copy number variations data

PLINK thresholds NO. of networks NO. of SNPs NO. of SNP pairs
0.1 2 1(2), 2(49) 1(1), 2(60)
0.05 4 1(3), 2(4), 3(9), 4(20) 1(2), 2(3), 3(8), 4(21)
0.01 5 1(2), 2(2), 3(2), 4(2), 5(5) 1(1), 2(1), 3(1), 4(1), 5(4)
0.005 3 1(2), 2(2), 3(5) 1(1), 2(1), 3(4)
0.001 1 1(2) 1(1)