Skip to main content

Table 2 Results and properties of our official runs.

From: Detection of interaction articles and experimental methods in biomedical literature

Run Acc Spec Sens F-Score MCC AUC iP/R ME Feat DTH
Official run 1 88.68 97.64 38.57 50.83 0.48297 63.85 + WMP 0.50
Official run 2 87.93 93.06 59.23 59.82 0.52727 63.89 + WMP 0.20
Official run 3 67.05 64.19 83.08 43.34 0.34244 41.74 P  
Official run 4 73.68 74.13 71.21 45.08 0.34650 41.74 P  
Official run 5 88.00 94.40 52.20 56.89 0.50255 62.39 + WM 0.25
Post hoc run 2a 86.90 90.57 66.37 60.58 0.53089 64.06 + WMP 0.20
Post hoc run 6 87.53 91.57 64.95 61.24 0.53969 66.30 + WMPBS 0.21
  1. Additionally we give our post hoc run 2a, performed without a minimal feature count threshold of 3 and bi-normal feature selection (20,000). Our best post hoc run 6 uses bigrams (B) and syntactic features (S). Features considered are W (bag of words), M (MeSH), P (PPIscore), B (bigrams), S (syntactic) - for a detailed description see page 3.