Table 6 Public software and resources used in the GN task.
Step | Software | Other Public Resources |
|---|---|---|
1) | ABNER [26] AIIAGMT [27] BANNER [28] GNAT [29] NERsuite [30] LingPipe [31] | Entrez Gene [32] Gene and Protein Synonym DataBase (GPSDB) [33] Unified Medical Language System (UMLS) [34] UniProt [35] |
2) | Linnaeus [25] | NCBI Taxonomy |
3) & 4) | Entrez Gene [32] Lucene [38] | BioThesaurus [39] GeneRIF annotations Gene Ontology (GO) annotations & predictions [40] MeSH annotations OMIM records |