Table 6 Public software and resources used in the GN task.
| Step | Software | Other Public Resources |
|---|---|---|
| 1) |
ABNER [26] AIIAGMT [27] BANNER [28] GNAT [29] NERsuite [30] LingPipe [31] |
Entrez Gene [32] Gene and Protein Synonym DataBase (GPSDB) [33] Unified Medical Language System (UMLS) [34] UniProt [35] |
| 2) | Linnaeus [25] |
NCBI Taxonomy Cell Line Knowledge Base (CLKB) [36, 37] |
| 3) & 4) |
Entrez Gene [32] Lucene [38] |
BioThesaurus [39] GeneRIF annotations Gene Ontology (GO) annotations & predictions [40] MeSH annotations OMIM records |