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Table 7 Analysis of Submitted Runs on the BioCreative III GN test corpus

From: Soft tagging of overlapping high confidence gene mention variants for cross-species full-text gene normalization

Annotation Run GN records False-Positives False-Negatives
   Min Median Max Min Median Max Total (%)
  Truth 1 19 375     
test50.gold R1 1 18 80 1 9 35 1283 (76.87)
  R2 1 19 82 1 10 44 1277 (76.51)
  R3 1 19 84 1 10 45 1275 (76.39)
  Truth 1 36 219     
test50.silver R1 1 18 80 1 2 14 1072 (58.64)
  R2 1 19 82 1 3 20 1039 (56.83)
  R3 1 19 84 1 3 20 1031 (56.40)
  Truth 1 12 375     
test507.silver1 R1 1 9 80 1 1 35 5342 (56.96)
  R2 1 9 82 1 1 44 5296 (56.47)
  R3 1 10 84 1 2 45 5249 (55.97)
  Truth 1 11 219     
test507.silver2 R1 1 9 80 1 1 14 4927 (52.84)
  R2 1 9 82 1 1 20 4858 (52.10)
  R3 1 10 84 1 1 20 4805 (51.53)