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Table 5 Our strategies vs. BioCreative III participant average on gold-50 test set

From: Multi-stage gene normalization for full-text articles with context-based species filtering for dynamic dictionary entry selection

Configuration Test set gold standard 50
  TAP5 TAP10 TAP20
  TAP5 relative improvement TAP10 relative improvement TAP20 relative improvement
BioCreative III
Average (Baseline)
0.1421 - - 0.1643 - - 0.1764 - -
Static strategy
(Team 101_R3)
0.1773 +0.0352 +24.77% 0.2096 +0.0453 +27.57% 0.2374 +0.0610 +34.58%
Article-wide species 0.2012 +0.0591 +41.59% 0.2312 +0.0669 +40.72% 0.2480 +0.0716 +40.59%
Section-wide species 0.2007 +0.0586 +41.24% 0.2319 +0.0676 +41.14% 0.2480 +0.0716 +40.59%
Optimal Dynamic Dictionary 0.2708 +0.1287 +90.57% 0.3136 +0.1493 +90.87% 0.3140 +0.1376 +78.00%