From: Consistency-based detection of potential tumor-specific deletions in matched normal/tumor genomes
Data Set | Deletions | Confl. Deletions | Del. ≥ 20 | Confl. Del. ≥ 20 |
---|---|---|---|---|
Normal | 2,765 | 29 (1.0%) | 1,338 | 23 (1.7%) |
Tumor | 46,146 | 14,234 (30.8%) | 15,644 | 5,990 (38.3%) |
Tumor-Subset | 680 | 217 (31.9%) | 628 | 206 (32.8%) |
Pooled Tumor-spec. | 44,276 | 13,644 (30.8%) | 14,377 | 5,541 (38.5%) |
Pooled-Subset Tumor-spec. | 137 | 97 (70.8%) | 125 | 92 (73.6%) |