Table 1 Lines identified by MIPHENO and Z methods
From: MIPHENO: data normalization for high throughput metabolite analysis
Locus | Description | Tissue | MIPHENO Cutoff = 0.1 | Zscore Cutoff = 2.5 | Zscore Cutoff = 1.3 |
|---|---|---|---|---|---|
At1g08250 | ADT6: Plastid-localized | Seed | High: GLN, TYR | High: GLN, TYR | |
arogenate dehydratase | Leaf | ||||
At1g09795 | ATATP-PRT2: ATP | Seed | |||
phosphoribosyl transferase | Leaf | High: HIS | High: HIS, LEU | ||
At1g11790 | ADT1: Plastid-localized | Seed | |||
arogenate dehydratase | Leaf | Low: PHE | Low: PHE | ||
At1g65960 | GAD2: glutamate | Seed | Low: GABA | ||
decarboxylase | Leaf | Low: GABA | Low: GABA | Low: GABA | |
At2g39800 | P5CS1: delta1-pyrroline- | Seed | Low: HPRO | ||
5-carboxylate synthase | Leaf | Low: PRO | Low: PRO | ||
At3g11170 | FAD7: Responsible for the synthesis of 16:3 and | Seed | |||
18:3 fatty acids | Leaf | High: 16:1D7, 16:2, 18:1D9, 18:2; Low: 16:3, 18:3 | High: 16:2, 18:1D9, 18:2; Low: 16:3, 18:3 | High: 16:1D7, 16:2, 18:1D9, 18:1D11, 18:2; Low: 16:3, 18:3 | |
At3g45300 | IVD: Isovaleryl-CoA | Seed | High: ARG, GABA, HIS, ILE, LEU, MET, TRP, VAL; Low: GLU | High: ARG, GABA, HIS, ILE, LEU, TRP, VAL, MET; Low: GLU | High: N, ARG, GABA, HIS, ILE, LEU, LYS, MET, PRO, SER, TRP, TYR, VAL; Low: GLU |
Dehydrogenase | Leaf | High: 16:3; Low: 18:2 | High: 16:3, GABA; Low 18:2 | ||
At4g19710 | AK-HSDK II: Bifunctional aspartate | Seed | |||
kinase, homoserine dehydrogenase. | Leaf | High: 18:1D11, CYS, HSER, ILE, THR | High: CYS, HSER, ILE, THR | High: 18:1D11, CYS, HSER, ILE, THR | |
At4g27030* | FAD4: Palmitate | Seed | |||
desaturase | Leaf | High: 16:0, ALA, GLN, L.ALA; Low: 16:1D3 | High: ALA; Low: 16:1D3 | High: 16:0, ALA, GLN, SER, TRP; Low: 16:1D3 | |
At4g33150 | LKR/SDH: Splice variant of a bifunctional | Seed | High: HIS, LYS; Low: GLU | High: HIS, LYS | High: HIS, LYS, PRO |
enzyme for lysine catabolism | Leaf | ||||
At5g05730 | ASA1: Alpha subunit of | Seed | |||
anthranilate synthase | Leaf | Low: TRP | Low: TRP | Low: TRP | |
At5g53460 | GLT1: NADH-dependent glutamate | Seed | High: ASN; Low: ASP | High: ASN, CYS; Low: ASP | |
synthase | Leaf |