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Figure 2 | BMC Bioinformatics

Figure 2

From: Handling the data management needs of high-throughput sequencing data: SpeedGene, a compression algorithm for the efficient storage of genetic data

Figure 2

Application of Sub-algorithm I to the toy example. Genetic information of the first four markers for the first three individuals in the toy example is extracted here to demonstrate the sub-algorithm I. Each row represents the four genotypes of one individual. The minor alleles for the four markers are assumed to be 2 2 2 1 respectively, and are underlined. Genotype 0 0 represents missing genotypes in the original dataset, which is converted to 3 to indicate missing genotypes.

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BMC Bioinformatics

ISSN: 1471-2105

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