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Table 1 Cancer Gene Enrichment rate of various breast cancer gene signatures

From: Core module biomarker identification with network exploration for breast cancer metastasis

 

CMI-COMBINER

CORG-COMBINER

Subnetwork

G70

G76

NetPath

54.17%*

50.41%*

26.33%*

10.00%

10.53%

Atlas

60.42%*

46.34%

32.87%

15.71%

18.42%

Census

11.46%*

13.82%*

5.42%*

2.86%

0.00%

CANgene

1.04%

1.63%

0.52%

0.00%

0.00%

G2SBC

43.75%*

46.34%*

19.02%

21.43%

10.53%

COSMIC

16.67%

17.89%*

7.06%

4.29%

1.32%

KEGG

35.42%*

29.27%*

9.90%*

8.57%

1.32%

  1. * p-value < 0.05 for hypergeometric tests