Figure 8From: ROCS: a Reproducibility Index and Confidence Score for Interaction Proteomics StudiesFDR computed from SAINT posterior probability output ( P SAINT ) as a function of procedural stages: from the initial “Naïve” stage (“ N ” – SAINT -only), to the “Reproducible” stage (“ R ”), and to the final “Specific” stage (“ S ” – ROCS-SAINT ) in the CTNNBIP1 (left) and STK24 (right) AP-MS bait experiment. Results are reported for C S > C ^ S cutoff and the marginal inclusion probability thresholds p ˜ min C and p ˜ min B as determined in each AP-MS experiment (see Tables 1 and 3).Back to article page