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Figure 3 | BMC Bioinformatics

Figure 3

From: Down-weighting overlapping genes improves gene set analysis

Figure 3

Comparing the p-values and ranks of target pathways between gene set analysis methods when analyzing 143 KEGG non-metabolic pathways. The boxplots show the distribution of the target pathways p-value (left panel) and ranks (middle panel), as well as the paired difference in ranks with respect to GSA, chosen as reference method (right panel). The lower the p-values, ranks and ranks differences, the better method.

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