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Figure 1 | BMC Bioinformatics

Figure 1

From: QuartetS-DB: a large-scale orthology database for prokaryotes and eukaryotes inferred by evolutionary evidence

Figure 1

QuartetS-DB Web Interface and performance curves for “Pairwise Orthologs”. (a) Web interface to search, view, and download pairwise orthologs for any two of 1621 species. By adjusting the QuartetS cutoff value Ω, users can balance the accuracy and coverage of the retrieved pairwise orthologs to support particular applications. (b, c) Performance curves obtained using varying cutoff values. The false positive rate was estimated using KEGG annotations (KO numbers) for ~900 species. The arrow in each plot indicates the result for the default cutoff value (Ω = 20). Detailed step-by-step instructions for this application can be found within the QuartetS-DB Web site under “User’s Guide”.

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BMC Bioinformatics

ISSN: 1471-2105

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