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Table 12 Ranking and differences among empirical substitution matrices

From: Surprising results on phylogenetic tree building methods based on molecular sequences

  Δ n
non Metazoa
GCB ≥ WAG -0.0005±0.0005 1068200
WAG JTT -0.0076±0.0006 1068200
JTT > LG -0.0007±0.0006 1068200
Metazoa
JTT WAG -0.0116±0.0017 476904
WAG GCB -0.0082±0.0015 476904
GCB LG -0.0084±0.0017 476904