Detecting sequence dependent transcriptional pauses from RNA and protein number time series

BMC Bioinformatics

Table 3 Six different models used for detection of pauses

Model	Features
A	No sequence-dependent pause sites.
B	Pause site at nucleotide 500.
C	Pause site at nucleotide 250.
D	Pause site at nucleotide 750.
E	Pause site with mean duration $τ_{n_{p}} = 23.5$ s at nucleotide 500.
F	Pause site with mean duration $τ_{n_{p}} = 94$ s at nucleotide 500.

The six models with different pause characteristics are considered for the purposes of detection and classification of sequence dependent pauses.

ISSN: 1471-2105