Table 1 FastHN vs. Dendroscope 3 on 15 tree-pairs in the Poaceae dataset
FastHN | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
pair | #taxa | h | 000 | 001 | 010 | 011 | 100 | 101 | 110 | 111 | Dendroscope |
ndhF,phyB | 40 | 14 | 19 | 15 | 7 | 5 | 1 | 1 | 2 | 1 | 2 |
ndhF,rbcL | 36 | 13 | 5 | 5 | 6 | 5 | 1 | 1 | 1 | 1 | 1 |
ndhF,rpoC2 | 34 | 12 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
ndhF,waxy | 19 | 9 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
ndhF,ITS | 46 | 19 | 556 | 537 | 53 | 97 | 1 | 1 | 1 | 1 | 2 |
phyB,rbcL | 21 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
phyB,rpoC2 | 21 | 7 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
phyB,waxy | 14 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
phyB,ITS | 30 | 8 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
rbcL,rpoC2 | 26 | 13 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
rbcL,waxy | 12 | 7 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
rbcL,ITS | 29 | 14 | 10 | 9 | 2 | 2 | 4 | 3 | 1 | 1 | 9 |
rpoC2,waxy | 10 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
rpoC2,ITS | 31 | 15 | 14 | 13 | 14 | 8 | 2 | 2 | 1 | 1 | 2 |
waxy,ITS | 15 | 8 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |