Table 2 Declustering Details
From: Genes2FANs: connecting genes through functional association networks
Network | Declustering Constant (Iterations) | Nodes Before | Nodes After | Edges Before | Edges After |
|---|---|---|---|---|---|
CMAP co-expression | 2,000 | 8,924 | 8,924 | 119,420 | 61,362 |
Transcription Factors (ChIP-X) | 1,500 | 13,223 | 13,223 | 110,901 | 70,347 |
GeneRIFs | 2,000 | 3,777 | 3,777 | 52,512 | 27,487 |
GO Molecular Function | 3,000 | 2,969 | 2,944 | 81,895 | 23,356 |
MicroRNA | 3,000 | 6,590 | 6,590 | 176,766 | 46,161 |
Mouse Phenotype | 3,300 | 7,795 | 7,553 | 290,381 | 52,637 |
Metabolites | 3,500 | 3,692 | 3,577 | 205,468 | 28,617 |
Structural Domains | 3,500 | 7,115 | 6,746 | 247,885 | 46,463 |
GO Biological Process | 2,300 | 4,305 | 4,287 | 65,669 | 29,988 |