Minimalist ensemble algorithms for genome-wide protein localization prediction

BMC Bioinformatics

Table 4 Prediction performance (MCC Scores) of individual predictors for the Yeast High-Res dataset

	YLoc (2010)	MultiLoc2 (2009)	Subcell (2008)	WoLFPSORT (2007)	CELLO (2006)	NetLoc (2010)	LR with 5 predictors without NetLoc	LR with all 6 predictors
Cytosol	0.441	0.293	0.146	0.251	0.255	0.247	0.459	0.555
Mitochondrion	0.689	0.496	0.251	0.510	0.501	0.318	0.684	0.713
Nucleus	0.405	0.275	0.181	0.311	0.306	0.434	0.351	0.473
ER	0.207	0.203	0.022	0.059	0.000	0.340	0.431	0.463
Vacuole	0.115	0.045	0.034	0.000	0.061	0.189	0.174	0.191
Golgi	0.008	0.010	0.054	0.118	−0.005	0.465	0.038	0.275
Cell Periphery	0.107	0.044	0.068	0.142	0.090	0.449	0.04	0.269
Overall accuracy	0.506	0.473	0.300	0.362	0.354	0.523	0.585	0.640

ISSN: 1471-2105