Skip to main content

Table 11 DoBi’s performance for proteins of benchmark v4.0 in bound states

From: Protein-protein binding site identification by enumerating the configurations

Typea

No. of complexes

Sucb

Accc

Covd

M e

V f

Enzyme-Inhibitor

52

77.6

61.8

67.9

22.6

6.3

Antibody-Antigen

25

56.0

51.6

70.1

19.3

6.5

Others

99

66.7

58.2

69.1

24.0

10.8

Overall

176

68.2

57.5

68.9

22.9

9.3

  1. aType is based on the broad biochemical categories.
  2. bSuc (%) is the success rate of DoBi on the data set.
  3. cAcc (%) is the average accuracy of DoBi on the data set.
  4. dCov (%) is the average coverage of DoBi on the data set.
  5. eM is the average of the sizes predicted by DoBi on the data set.
  6. fV is the standard deviation of the sizes predicted by DoBi on the data set.
Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us