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Table 1 Evaluation results of ten WormBase data types using the ten testing sets

From: Automatic categorization of diverse experimental information in the bioscience literature

Data types

Recall (testing set)

Precision (testing set)

RNAi

0.99

0.78

Antibody

0.94

0.81

Phenotype

0.86

0.92

Gene regulation

0.88

0.70

Mutant allele sequence

0.93

0.98

Gene expression

0.95

0.88

Gene product interaction*

NA

NA

Overexpression phenotype

0.91

0.81

Gene interaction

0.85

0.79

Gene structure correction

0.90

0.82

  1. The SVM analysis was done using training/testing sets specified in Additional File 4, Table S3 and Methods. *Gene product interaction does not have enough labeled papers and no evaluation was done using the testing set.
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BMC Bioinformatics

ISSN: 1471-2105

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