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Table 4 Clustering results on the data sets listed in Table 1

From: A novel hierarchical clustering algorithm for gene sequences

 

mBKM with DMk

BlastClust

CD-HIT-EST

Data

F-measure

Time(s)

F-measure

Time(s)

F-measure

Time(s)

DS1

0.8080

6.875

0.4525

48

0.2713

39.8

DS2

0.9645

1.844

0.7515

13.6

0.5924

6.4

DS3

0.9143

2.375

0.3693

12.7

0.3157

17.1

DS4

0.9587

1.328

0.5224

9.3

0.4007

6.8

  1. (Time contains the time of similarity measuring and clustering)
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BMC Bioinformatics

ISSN: 1471-2105

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