Table 2 Pathways that the top ranking genes of different methods are enriched in in breast cancer patient datasets
Top genes | Method | Pathway | Benjaminp |
|---|---|---|---|
10 | NGP-ND | REACT_152:Cell Cycle, Mitotic | 3.00E-04 |
REACT_383:DNA Replication | 6.51E-04 | ||
REACT_1538:Cell Cycle Checkpoints | 0.020 | ||
25 | NGP-ND | REACT_1538:Cell Cycle Checkpoints | 3.84E-05 |
REACT_152:Cell Cycle, Mitotic | 1.13E-04 | ||
REACT_383:DNA Replication | 0.005 | ||
50 | NGP-ND | REACT_152:Cell Cycle, Mitotic | 3.62E-05 |
REACT_1538:Cell Cycle Checkpoints | 1.93E-04 | ||
REACT_383:DNA Replication | 0.0120 |