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Figure 1 | BMC Bioinformatics

Figure 1

From: CLAG: an unsupervised non hierarchical clustering algorithm handling biological data

Figure 1

Entries distribution and grids. Toy example based on a matrix of 100 entries with environment E of size |M| = 5. A: the distribution of entries, partitioned with a 0-grid (solid lines) and with a 1-grid (dashed lines). Alternated grey and green colors are used to identify quantile regions. Grids are defined with Δ = .20, and therefore, each quantile region contains exactly 20 entries. B: elements V,ZN, represented by 5 character values in the matrix, are plot in the distribution: 5 circles and 5 diamonts represent V and Z, respectively. For each XE, A(V,X) = A(Z,X)and this implies an environmental score S env (V,Z) = 1. C: contrary to B, here the 5 pairs of entries, A(V,X)and A(Z,X), are not necessarily equal nor highly similar (that is, belonging to the same quantile) and they are indicated by a straight line linking entries positions.S env (V,Z)is expected not to be maximal.

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