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Table 1 Evaluation of the MSD method on the viral infection and drug response datasets using all genes

From: Early classification of multivariate temporal observations by extraction of interpretable shapelets

Dataset Number of genes Accuracy Relative accuracy Coverage Earliness F 1
H3N2 23 77.78 85.71 100 62.50 0.5060
HRV 26 70.00 71.43 100 40.00 0.6462
Baranzini3A 3 70.00 73.91 95.83 46.26 0.6080
Baranzini3B 3 66.67 68.00 100 44.81 0.6039
Baranzini6 6 70.83 70.83 100 42.86 0.6325
Baranzini12 12 66.67 66.67 100 42.86 0.6154
Lin9 9 67.86 69.57 100 44.00 0.6136
Costa17 17 68.00 69.23 100 45.24 0.6067
  1. The performance of the MSD method on 8 datasets is shown in the table. The MSD method achieved good accuracy on most of the datasets using a small fraction of the time series. The distribution of the statistics were skewed and not symmetric, so we report the median of the statistic.