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Table 1 Evaluation of the MSD method on the viral infection and drug response datasets using all genes

From: Early classification of multivariate temporal observations by extraction of interpretable shapelets

Dataset

Number of genes

Accuracy

Relative accuracy

Coverage

Earliness

F 1

H3N2

23

77.78

85.71

100

62.50

0.5060

HRV

26

70.00

71.43

100

40.00

0.6462

Baranzini3A

3

70.00

73.91

95.83

46.26

0.6080

Baranzini3B

3

66.67

68.00

100

44.81

0.6039

Baranzini6

6

70.83

70.83

100

42.86

0.6325

Baranzini12

12

66.67

66.67

100

42.86

0.6154

Lin9

9

67.86

69.57

100

44.00

0.6136

Costa17

17

68.00

69.23

100

45.24

0.6067

  1. The performance of the MSD method on 8 datasets is shown in the table. The MSD method achieved good accuracy on most of the datasets using a small fraction of the time series. The distribution of the statistics were skewed and not symmetric, so we report the median of the statistic.