Table 2 OpenCL kernel performance for different number of query sequences
From: Coupling SIMD and SIMT architectures to boost performance of a phylogeny-aware alignment kernel
Execution times | GCUPS | Speedup GPU vs | ||||||
|---|---|---|---|---|---|---|---|---|
Number of queries | Seq | SSE(4) | GPU | Seq | SSE(4) | GPU | Seq | SSE(4) |
100 | 39.60 | 1.14 | 0.78 | 0.40 | 14.10 | 20.2 | 50.8 | 1.46 |
250 | 98.31 | 2.78 | 1.87 | 0.41 | 14.27 | 20.9 | 52.6 | 1.48 |
500 | 197.57 | 5.57 | 3.7 | 0.40 | 14.33 | 21.1 | 53.4 | 1.51 |
750 | 296.23 | 8.40 | 5.5 | 0.40 | 14.24 | 21.1 | 53.9 | 1.53 |
1000 | 395.59 | 11.20 | 7.4 | 0.40 | 14.28 | 21.2 | 53.4 | 1.51 |
1250 | 494.65 | 14.30 | 9.23 | 0.40 | 14.29 | 21.2 | 53.6 | 1.52 |