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Table 4 Detected CNVs in a common deletion on Chromosome 8

From: Reconstructing DNA copy number by joint segmentation of multiple sequences

Method #CN= 0 #CN=1 #CN=3 #Families with Mendelian errors Time (min.)
PennCNV 125 39 102 35 0.19
GFL-Individual 123 97 0 20 0.21
GFL-Pedigree 123 137 0 15 0.09
MSSCAN-Pedigree 123 154 0 15 0.11
  1. Across the various algorithms, subjects are assigned to one of 4 copy numbers. For each algorithm, we report the total numbers of CN≠2 identified, the total number of nuclear families with Mendelian errors, and the average computation time (in minutes) per sample for the analysis of Chromosome 8.