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Table 1 Posterior probabilities for the major viral proteins detected in the mass spectra of the whole virus digest mass spectra of the PanVax vaccine strain

From: FluShuffle and FluResort: new algorithms to identify reassorted strains of the influenza virus by mass spectrometry

Viral antigen

Strain

Number of matched tryptic peptides

Assignment confidence (%) trypsin digest only

Number of matched Glu-C peptides

Assignment confidence (%) Glu-C digest only

Assignment confidence (%) combined digest

HA

A/California/07/2009

6

100

9

100

100

NA

A/California/07/2009

2

46

3

100

100

NP

A/Puerto Rico/08/1934

13

100

7

30

100

M1

A/Puerto Rico/08/1934

6

47

3

1

66

  1. Values are shown in percentages were estimated with FluShuffle and summed over the clade.