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Table 4 Evaluation metrics for S. aureus dataset

From: Wavelet-based detection of transcriptional activity on a novel Staphylococcus aureus tiling microarray

Evaluation metrics (S. aureus)

Tiling Signal

Metric

PMSW

SCM

ZCL

ZCLSure

WT Forward

PPV

0.6298

0.6498

0.6248

0.6407

WT Forward

Sens

0.8657

0.8766

0.8715

0.8719

WT Reverse

PPV

0.6867

0.6993

0.7050

0.6989

WT Reverse

Sens

0.8506

0.8560

0.8388

0.8535

Δ sigB Forward

PPV

0.6238

0.6388

0.6227

0.6308

Δ sigB Forward

Sens

0.9054

0.9035

0.9027

0.9036

Δ sigB Reverse

PPV

0.6664

0.6815

0.6765

0.6748

Δ sigB Reverse

Sens

0.8697

0.8684

0.8667

0.8515

  1. Mean number of detected TARs, probe-level PPV, probe-level sensitivity and computational time for PMSW, SCM and ZCL methods.
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BMC Bioinformatics

ISSN: 1471-2105

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