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Table 1 The five MAQC-II datasets, representing endpoints A through I that are available from the Gene Expression Omnibus

From: The top-scoring ‘N’ algorithm: a generalized relative expression classification method from small numbers of biomolecules

Dataset

Endpoint

Description

Platform

Hamner

A

Lung tumorigen vs. non-tumorigen

Affymetrix Mouse 430 2.0

Iconix

B

Non-genotoxic liver carcinogens vs. non-carcinogens

Amersham Uniset Rat 1 Bioarray

NIEHS

C

Liver toxicants vs. non-toxicants

Affymetrix Rat 230 2.0

Breast Cancer

D

Pre-operative treatment response

Affymetrix Human U133A

 

E

Estrogen receptor status

 

Multiple Myeloma

F

Overall survival milestone outcome

Affymetrix Human U133 Plus 2.0

 

G

Event-free survival milestone outcome

 
 

H

Gender of patient (positive control)

 
 

I

Random class labels (negative control)