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Table 2 ID converter tools, data sources and availability

From: AbsIDconvert: An absolute approach for converting genetic identifiers at different granularities

Name Data Sources Webpage
DAVID GenBank, RefSeq, KEGG, OMIM, UniGene http://david.abcc.ncifcrf.gov/
Babelomics Go, KEGG, Ensembl and others http://babelomics.bioinfo.cipf.es/
g:Convert GO, KEGG, Ensembl, TRANSFAC, Reactome http://biit.cs.ut.ee/gprofiler/
HMS and IC Ensembl, GO, KEGG and others http://biodb.jp/
Synergizer Ensembl, NCBI, RGD, SGD, KEGG, WormBase and EcoCyc http://llama.mshri.on.ca/synergizer/translate/
Clone/Gene ID Converter Ensembl, NCBI, Pubmed, UCSC, KEGG, Reactome http://idconverter.bioinfo.cnio.es/
MADGene GEO, UniGene, Entrez and others http://www.madtools.org/
GATExplorer Ensembl, Affymetrix®; http://bioinfow.dep.usal.es/xgate/principal.php
NetAffx NCBI, GO, KEGG and others http://www.affymetrix.com/analysis/netaffx/
PLANdbAffy Affymetrix®;, UCSC, NCBI http://affymetrix2.bioinf.fbb.msu.ru/
probeMatchDB UniGene, HomoloGene http://brainarray.mbni.med.umich.edu/Brainarray/
Uniprot GenBank, RefSeq, GO and others http://www.uniprot.org/
Onto-Translate Ensembl, GO, KEGG and others http://vortex.cs.wayne.edu/
AliasServer Ensembl, EMBL, NCBI, SGD and others http://cbi.labri.fr/outils/alias/
MatchMiner Affymetrix®;, UCSC, UniGene, Entrez, OMIM http://discover.nci.nih.gov/matchminer/index.jsp
GeneMerge GO, KEGG http://genemerge.cbcb.umd.edu/
BioMart NCBI, GO, KEGG and others http://www.biomart.org/
BridgeDb Ensembl and others http://www.bridgedb.org/
AbsIDconvert UCSC, NCBI, Ensembl, Agilent, Affymetrix®; and others http://bioinformatics.louisville.edu/abid/