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Table 1 Datasets used in benchmarking

From: Mapping single molecule sequencing reads using basic local alignment with successive refinement (BLASR): application and theory

Dataset

Description

E. coli-PacBioRS

E. coli O104:H4 sequenced at 48× coverage by the

 

Pacific Biosciences-RS sequencer.

E. coli-simulated

50× coverage of reads simulated from E. coli O104:H4.

H. sapiens

100 MB of reads simulated from the human genome.

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BMC Bioinformatics

ISSN: 1471-2105

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