Table 4 Examples of pre-miRNAs with multiple interspersed hits but not classified as TE or TE-derived by ncRNAclassifier
pre-miRNA name | Genome | Similar hits | Chromosomes |
|---|---|---|---|
CEL-MIR-1832 | Nematode | 32 | 5 |
CEL-MIR-1833 | Nematode | 11 | 4 |
CIN-MIR-4105 | Sea squirt | 13 | 11 |
CIN-MIR-4154 | Sea squirt | 34 | 28 |
HSA-MIR-320d-2 | Human | 9 | 7 |
HSA-MIR-466 | Human | 15 | 12 |
HSA-MIR-1233-1 | Human | 24 | 6 |
HSA-MIR-3669 | Human | 9 | 6 |
MMU-MIR-297a-6 | Mouse | 28 | 10 |
MMU-MIR-467g | Mouse | 23 | 12 |
RNO-MIR-466b-2 | Rat | 5 | 4 |
XTR-MIR-427-1 | Frog | 7 | 7 |