Table 1 Evaluation result
From: ESTclean: a cleaning tool for next-gen transcriptome shotgun sequencing
Strand | 5’ | 3’ | ||
|---|---|---|---|---|
Program | SeqClean | ESTclean | SeqClean | ESTclean |
Under-trimmed | 79,369 | 61,138 | 407,612 | 285,763 |
Over-trimmed | 739 | 25,055 | 24,608 | 102,840 |
From: ESTclean: a cleaning tool for next-gen transcriptome shotgun sequencing
Strand | 5’ | 3’ | ||
|---|---|---|---|---|
Program | SeqClean | ESTclean | SeqClean | ESTclean |
Under-trimmed | 79,369 | 61,138 | 407,612 | 285,763 |
Over-trimmed | 739 | 25,055 | 24,608 | 102,840 |