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Table 2 SABMark Twilight Zone multiple alignments (all values are averages)

From: Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment

  Core length RMSD Seq Str Cons Partial length Partial Seq
Mustang 63.4 4.12 3.92 3.05 3.49 97.6 4.46
Matt 66.9 2.64 4.15 2.29 3.35 84.0 4.58
SAlign 59.6 3.51 3.88 2.83 3.36 90.7 4.34
(Promals3D) 75.4 - 3.89 - - 111.8 4.39
Formatt (mafft) 45.01 1.97 3.85 1.77 2.81 54.0 4.32
Formatt (clustalw) 64.05 2.75 3.98 2.32 3.15 76.2 4.49
Formatt (muscle) 64.37 2.77 3.99 2.33 3.16 76.0 4.55
Formatt (probcons) 64.5 2.97 4.00 2.44 3.22 75.6 4.54