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Table 1 Sample information and sequencing results from 9 various normal tissues (Group I) and 14 cerebellar cortices with schizophrenia (SCZD) and 6 normal cerebellar cortices (Group II)

From: dsPIG: a tool to predict imprinted genes from the deep sequencing of whole transcriptomes

 

Sample

Type

Ethnicity

Average read length

Number of reads

Unique genomic reads

Group I

Adipose

Normal

Caucasian

32

27752231

63%

 

Brain

Normal

Caucasian

32

17246957

64%

 

Breast

Normal

Caucasian

32

16120746

66%

 

Colon

Normal

Caucasian

32

28435996

62%

 

Heart

Normal

Caucasian

32

20169301

56%

 

Liver

Normal

Caucasian

32

18517121

62%

 

Lymph node

Normal

Caucasian

32

27492254

57%

 

Skeletal muscle

Normal

Caucasian

32

22640454

64%

 

Testes

Normal

Caucasian

32

27303938

68%

Group II

Cerebellum 1

SCZD

African American

32

23241938

68%

 

Cerebellum 11S

SCZD

African American

35

14572861

54%

 

Cerebellum 18

SCZD

Caucasian

32

25129004

69%

 

Cerebellum 1S

SCZD

Caucasian

32

36760977

64%

 

Cerebellum 2

SCZD

African American

36

19241726

60%

 

Cerebellum 31

SCZD

Caucasian

36

19867823

63%

 

Cerebellum 36

SCZD

Caucasian

32

20111871

67%

 

Cerebellum 39

SCZD

African American

33

23055778

63%

 

Cerebellum 3S

SCZD

African American

34

17846750

46%

 

Cerebellum 41

SCZD

Caucasian

32

38658913

66%

 

Cerebellum 42

SCZD

African American

35

17588723

56%

 

Cerebellum 5

SCZD

Caucasian

36

21229299

61%

 

Cerebellum 5S

SCZD

African American

32

28944566

66%

 

Cerebellum 7S

SCZD

Caucasian

34

13769073

54%

 

Cerebellum 17

Normal

Caucasian

36

12890252

47%

 

Cerebellum 2S

Normal

Caucasian

36

12482759

44%

 

Cerebellum 35

Normal

African American

36

25402905

63%

 

Cerebellum 40

Normal

Caucasian

36

24486091

64%

 

Cerebellum 6S

Normal

Caucasian

32

24347196

71%

 

Cerebellum 8S

Normal

African American

32

24016465

71%