Table 3 Performance of assignment algorithms as a function of choice of correct answer
From: Identifying structural domains of proteins using clustering
Algorithm1 | Correct answer | 1-domain | 2-domain | 3-domain | 4-domain | Overall2 |
|---|---|---|---|---|---|---|
SS | SCOP | 75% | 60% | 46% | 34% | 70% |
SS | CATH | 83% | 67% | 47% | 34% | 74% |
SS | SCOP or CATH3 | 83% | 75% | 64% | 55% | 79% |
SS | SCOP (given)4 | 99% | 86% | 71% | 75% | 95% |
CA | SCOP | 75% | 58% | 45% | 32% | 69% |
CA | CATH | 81% | 67% | 45% | 41% | 73% |
CA | SCOP or CATH3 | 82% | 74% | 64% | 60% | 79% |
CA | SCOP (given)4 | 100% | 84% | 81% | 69% | 95% |