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Table 8 Performance of mGOASVM on (a) the virus dataset and (b) the plant dataset
| (a) Performance on the viral protein dataset | |||||
|---|---|---|---|---|---|
| Input data | #homo | Actual accuracy of protein groups | Overall actual accuracy | ||
| l =1 | l =2 | l =3 | |||
| AC | 0 | 154/165 = 93.3% | 34/39 = 87.2% | 3/3 = 100% | 191/207 = 92.3% |
| S | 1 | 148/165 = 89.7% | 33/39 = 84.6% | 3/3 = 100% | 184/207 = 88.9% |
| S + AC | 1 | 151/165 = 91.5% | 34/39 = 87.2% | 3/3 = 100% | 188/207 = 90.8% |
| (b) Performance on the plant protein dataset | |||||
| Input data | #homo | Actual accuracy of protein groups | Overall actual accuracy | ||
| l =1 | l =2 | l =3 | |||
| AC | 0 | 813/904 = 89.9% | 49/71 = 69.0% | 1/3 = 33.3% | 863/978 = 88.2% |
| S | 1 | 802/904 = 88.7% | 52/71 = 73.2% | 1/3 = 33.3% | 855/978 = 87.4% |
| S + AC | 1 | 811/904 = 89.7% | 47/71 = 66.2% | 1/3 = 33.3% | 859/978 = 87.8% |
