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Table 8 Performance of mGOASVM on (a) the virus dataset and (b) the plant dataset

From: mGOASVM: Multi-label protein subcellular localization based on gene ontology and support vector machines

(a) Performance on the viral protein dataset
Input data #homo Actual accuracy of protein groups Overall actual accuracy
   l =1 l =2 l =3  
AC 0 154/165 = 93.3% 34/39 = 87.2% 3/3 = 100% 191/207 = 92.3%
S 1 148/165 = 89.7% 33/39 = 84.6% 3/3 = 100% 184/207 = 88.9%
S + AC 1 151/165 = 91.5% 34/39 = 87.2% 3/3 = 100% 188/207 = 90.8%
(b) Performance on the plant protein dataset
Input data #homo Actual accuracy of protein groups Overall actual accuracy
   l =1 l =2 l =3  
AC 0 813/904 = 89.9% 49/71 = 69.0% 1/3 = 33.3% 863/978 = 88.2%
S 1 802/904 = 88.7% 52/71 = 73.2% 1/3 = 33.3% 855/978 = 87.4%
S + AC 1 811/904 = 89.7% 47/71 = 66.2% 1/3 = 33.3% 859/978 = 87.8%
  1. S: Sequence; AC: Accession Number; # homo: Number of homologs used in the experiments; l (l=1,…,3): Number of co-locations. # homo=0 means only the true accession number is used.