|
(a) Performance on the viral protein dataset
|
|---|
|
Input data
|
#homo
|
Actual accuracy of protein groups
|
Overall actual accuracy
|
| | |
l
=1
|
l
=2
|
l
=3
| |
|
AC
|
0
|
154/165 = 93.3%
|
34/39 = 87.2%
|
3/3 = 100%
|
191/207 = 92.3%
|
|
S
|
1
|
148/165 = 89.7%
|
33/39 = 84.6%
|
3/3 = 100%
|
184/207 = 88.9%
|
|
S + AC
|
1
|
151/165 = 91.5%
|
34/39 = 87.2%
|
3/3 = 100%
|
188/207 = 90.8%
|
|
(b) Performance on the plant protein dataset
|
|
Input data
|
#homo
|
Actual accuracy of protein groups
|
Overall actual accuracy
|
| | |
l
=1
|
l
=2
|
l
=3
| |
|
AC
|
0
|
813/904 = 89.9%
|
49/71 = 69.0%
|
1/3 = 33.3%
|
863/978 = 88.2%
|
|
S
|
1
|
802/904 = 88.7%
|
52/71 = 73.2%
|
1/3 = 33.3%
|
855/978 = 87.4%
|
|
S + AC
|
1
|
811/904 = 89.7%
|
47/71 = 66.2%
|
1/3 = 33.3%
|
859/978 = 87.8%
|
- S: Sequence; AC: Accession Number; # homo: Number of homologs used in the experiments; l (l=1,…,3): Number of co-locations. # homo=0 means only the true accession number is used.
