An assessment on epitope prediction methods for protozoa genomes

BMC Bioinformatics

Table 1 Algorithms performance evaluation for B cell epitope prediction and CD8+ T cells epitope prediction

Algorithms	AUC values
CD8+ T cells epitope prediction
NetCTL	0.66
NetMHC	0.60
NetCTL and NetMHC	0.64
B cell epitope prediction
AAP12	0.52
BCPred12	0.62
BepiPred	0.53
AAP12 and BCPred12	0.77
AAP12 and BepiPred	0.49
BCPred12 and BepiPred	0.58
AAP12, BCPred12 and BepiPred	0.57

ISSN: 1471-2105