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Table 2 Number of sequences with correct overlap regions

From: PANDAseq: paired-end assembler for illumina sequences

Assember

Correct Assemblies

Percentage of Output

PANDAseq

628 131

96.30

BIPES (Merger)

621 357

94.63

SHERA

637 646

92.35

iTags (PHRAP)

3 578

0.55

  1. Summary of the number of correct overlap sequences in assembled output from sequenced V3-region ampli-cons of Methylococcus capsulatus strain Bath.
  2. The percentage of sequences with error-free overlap regions is shown as a fraction of the total output for each assembler.