Table 5 Prediction results of EpicCapo +REF using four influenza A strains categorized by specific alleles
Allele | # of predicted positive peptides | Super type | |||
|---|---|---|---|---|---|
H1N1 New York/4290/2009 | H5N1 Hong Kong/483/97 | H1N1 PR/8/34 | H3N2 Aichi/2/68 | ||
A *01:01 | 14 | 13 | 6 | 5 | A1 |
A *26:01 | 6 | 9 | 1 | 5 | A1 |
A *29:02 | 103 | 134 | 61 | 161 | ? |
A *02:01 | 122 | 160 | 71 | 168 | A2 |
A *02:02 | 302 | 370 | 162 | 391 | A2 |
A *02:03 | 268 | 326 | 144 | 307 | A2 |
A *02:06 | 200 | 250 | 105 | 264 | A2 |
A *68:02 | 198 | 220 | 109 | 277 | A2 |
A *24:02 | 90 | 108 | 50 | 150 | A24 |
A *03:01 | 85 | 94 | 50 | 136 | A3 |
A *11:01 | 162 | 176 | 91 | 229 | A3 |
A *31:01 | 183 | 227 | 110 | 245 | A3 |
A *33:01 | 96 | 117 | 62 | 110 | A3 |
A *68:01 | 263 | 346 | 151 | 325 | A3 |
Total | 2092 | 2550 | 1173 | 2773 | Â |