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Table 6 Comparison of epitopes identified by EpicCapo+REFwith the broadly protective influenza A viral epitopes identified by Uchida[50]

From: EpicCapo: epitope prediction using combined information of amino acid pairwise contact potentials and HLA-peptide contact site information

Viral strain

CTL epitopes identified by [[50]]

Shared alleles identified by EpicCapo+REF

H1N1 (A/PR/8/34)

GILGFVFTL

A*02:01, A*02:02, A*02:03, A*02:06

IILKANFSV

A*02:01, A*02:02, A*02:03, A*02:06, A*68:02

GMFNMLSTV

A*02:01, A*02:02, A*02:03, A*02:06

H3N2 (A/Aichi/2/68)

GILGFVFTL

A*02:01, A*02:02, A*02:03, A*02:06

VMLKANFSV

A*02:01, A*02:02, A*02:03, A*02:06

GMFNMLSTV

A*02:01, A*02:02, A*02:03, A*02:06

H1N1 (A/NewYork/4290/2009)

GILGFVFTL

A*02:01, A*02:02, A*02:03, A*02:06

IVLKANFSV

A*02:01, A*02:02, A*02:06, A*68:02

GMFNMLSTV

A*02:01, A*02:02, A*02:03, A*02:06

H5N1 (A/Hong Kong/483/97)

GILGFVFTL

A*02:01, A*02:02, A*02:03, A*02:06

IILKANFSV

A*02:01, A*02:02, A*02:03, A*02:06, A*68:02

 

GMFNMLSTV

A*02:01, A*02:02, A*02:03, A*02:06