Table 1 Processing time and limit of SNP markers for SNPEVG1 and SNPEVG3 of 32-bit (Windows 7) and 64-bit versions (Mac OS X) for one trait
From: SNPEVG: a graphical tool for GWAS graphing with mouse clicks
Number of SNPs | SNPEVG1 32-bit | SNPEVG1 64-bit | SNPEVG3 32-bit | SNPEVG3 64-bit |
|---|---|---|---|---|
(N) | Time (sec) | Time (sec) | Time (sec) | Time (sec) |
1,000,000 | 3.08 | 2.82 | 4.17 | 3.32 |
2,000,000 | 5.88 | 4.75 | 7.67 | 5.92 |
3,000,000 | 8.54 | 6.78 | 10.90 | 8.57 |
5,000,000 | 13.67 | 10.52 | 17.71 | 13.11 |
7,000,000 | 19.17 | 14.41 | 24.59 | 17.72 |
10,000,000 | 26.71 | 20.11 | 34.91 | 25.76 |
13,000,000 | Fail | 25.92 | Fail | 33.49 |
17,000,000 | Fail | 33.85 | Fail | 43.12 |
21,000,000 | Fail | 43.50 | Fail | 54.24 |
25,000,000 | Fail | 51.50 | Fail | 67.84 |
30,000,000 | Fail | 61.70 | Fail | 80.62 |