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Table 5 Learned query graph performance using the VirulentPred test set

From: Learning virulent proteins from integrated query networks

Data src.

Class. method

AUC

Accuracy

1-mer

SVM(RBF)

0.786

0.710

–

VirulentPred

0.860

0.818

GenNav

SVM(RBF)

0.940

0.868

GenNav

Ridge regression

0.935

0.863

GenNav

k NN

0.935

0.763

  1. Comparison of the top-performing integrated predictor against a sequence baseline and VirulentPred; all methods outlined in the table used the same set of proteins.