Table 2 Read mapping summary
From: Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study
Replicate | Raw reads | Un-mapped | Mapped |
|---|---|---|---|
KO_1 | 25153995 | 5713351 (22.7%) | 19440644 (77.3%) |
KO_2 | 26269828 | 3294901 (12.5%) | 22974927 (87.5%) |
KO_3 | 25988788 | 6032342 (23.2%) | 19956446 (76.8%) |
WT_1 | 20034326 | 2006957 (10.0%) | 18027369 (90.0%) |
WT_2 | 22221706 | 4486281 (20.2%) | 17735425 (79.8%) |
WT_3 | 45034903 | 4678496 (10.4%) | 40356407 (89.6%) |
total | 164703546 | 26212328 (15.9%) | 138491218 (84.1%) |