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Table 4 Performance comparison of promoter prediction methods on the human genome

From: A comparison study on feature selection of DNA structural properties for promoter prediction

Methods

Specificity

Sensitivity

F-measure

FirstEF

0.415

0.448

0.431

DragonGSF

0.686

0.357

0.470

McPromoter

0.623

0.204

0.307

EP3

0.565

0.413

0.477

Profisi

0.604

0.392

0.475

ARTS

0.672

0.381

0.486

Eponine

0.671

0.367

0.475

ProSom

0.573

0.414

0.481

PNNP

0.593

0.433

0.501

FSPP(ReliefF-300)

0.657

0.528

0.585

FSPP(Wrapper-SVM)

0.662

0.536

0.592

  1. These methods include nine existing promoter prediction methods and our prediction methods based on the filter and wrapper feature selection.
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BMC Bioinformatics

ISSN: 1471-2105

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