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Table 4 Evaluation on the datasets DS56bound and DS56unbound

From: Predicting protein-protein interface residues using local surface structural similarity

Dataset

Predictor

Precision%

Recall%

F1%

Accuracy%

CC%

AUC%

 

Promate

31.9

27.3

29.4

76.7

15.6

63.3

 

PINUP

37.3

31.9

34.4

78.4

21.7

63.7

DS56bound

Cons-PPISP

39.8

36.1

37.9

78.9

25.2

72.6

 

Meta-PPISP

43.3

25.8

32.3

80.8

22.9

74.4

 

PrISE C spe.

46.1

45.4

45.7

80.9

34.1

77.6

 

PrISE C hom.

43.6

42.4

43.0

80.0

30.9

76.3

 

Promate

28.7

27.3

28.0

76.6

14.0

62.7

 

PINUP

30.4

30.1

30.2

76.9

16.4

60.0

Ds56unbound

Cons-PPISP

37.4

34.5

35.9

79.5

23.8

71.2

 

Meta-PPISP

38.9

24.0

29.7

81.1

20.2

71.5

 

PrISE C spe.

43.7

44.0

43.8

81.2

32.6

75.5

 

PrISE C hom.

40.5

40.0

40.2

80.2

28.4

73.7

  1. "PrISE C spe." refers to the performance computed after filtering out from the repository samples extracted from homologs from the same species. "PrISE C hom." indicates that samples extracted from homologs were not considered in the prediction process.