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Table 1 Sample ID's and read numbers before and after mapping

From: Analysis of high-depth sequence data for studying viral diversity: a comparison of next generation sequencing platforms using Segminator II

  Illumina 454 Life Sciences
Sample ID No. of reads No. of reads mapped (%) No. of reads No. of reads mapped (%)
511 1160281 875620 (75) 4569 4082 (89)
512 2266246 1586144 (70) 5173 4286 (83)
513 2606959 1794027 (69) 9679 8972 (93)
533 1751178 1264611 (72) 6974 6339 (91)
534 1428288 1015404 (71) 7642 7093 (93)
535 832117 655689 (79) 10176 9444 (93)
538 1387955 1115917 (80) 6690 6282 (94)
540 2827392 2136159 (76) 5419 4985 (92)
541 1574181 1276311 (81) 5151 4835 (94)
578 2870922 2130089 (74) 17586 16307 (93)
579 1664978 1208913 (73) 14758 13657 (93)
580 1854234 1378426 (74) 14124 12990 (92)
  1. Unmapped and mapped reads
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BMC Bioinformatics

ISSN: 1471-2105

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