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Table 2 InterPro coverage of new domains at 10% FDR

From: Fitting hidden Markov models of protein domains to a target species: application to Plasmodium falciparum

 

InterPro Cov.

InterPro Cov. H0

Pfam

103 (53.9%)

3.34%

Score Adjustment

129 (54.2%)

2.85%

Enriched Alignment

230 (47.9%)

1.70%

Substitution Matrix

121 (53.5%)

3.06%

Match-state Clustering

191 (52.2%)

1.84%

  1. InterPro Cov.: Number and proportion (in parenthesis) of new domains belonging to an InterPro family previously known for the protein, for the different correction approaches and the standard Pfam library, at 10% FDR; InterPro Cov. H0: proportion of matches on random domains.
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BMC Bioinformatics

ISSN: 1471-2105

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